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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6996133_6996278_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6996133 - 6996278

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCCCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTGTTTTCAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

69.5

41.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

66.4

0.37

64.4

36.9

Minor 5ss

31.4

-2.1

3.2

40.6

45.6

Minor BPS

61.5

0.34

1.5

69.53

36.7

Associated Gene:

Gene:

PNRC2

Ensembl Gene ID:

ENSAPLG00000000996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000978

6995893 - 6997356

1464