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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7004703_7006361_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7004703 - 7006361

Intron Length:
1659

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTAAGTGCC

5'SS Class:
major

3'SS Sequence:
CTATTTTTTACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTAAAT

U12 Branch Point Sequence:
GAAACTTTAAAT

Flanking Amino Acid:
EIQFAQGDRKTPNQMKAKEG

Intron Amino Acid Position:
77

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.2
0.59
1.1
69.1
37.3

Major BPS
82.3
0.8
0.9
87.6
25.7

Major PPT
88.3
0.86
0.7
83.4
31.4

Minor 5ss
35.2
-1.7
3.2
41.6
38.8

Minor BPS
59.8
0.39
1.4
69.46
40.5

Associated Gene:

Gene:
SRSF10

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7003709 - 7008394
4686