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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7006458_7008124_R


Intron Information:

Intron Rank:
2

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
7006458 - 7008124

Intron Length:
1667

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTA|GTGAGGGGT

5'SS Class:
major

3'SS Sequence:
ACCACATTTGAAG|A

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TACTCAA

U12 Branch Point Sequence:
AGTACCTTAACA

Flanking Amino Acid:
VQYPFFRWLINVRDAEDALH

Intron Amino Acid Position:
45

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.1
0.4
1
59.4
39.6

Major BPS
77.9
0.69
0.8
77.9
25.8

Major PPT
58.3
0.19
1.1
56.5
37.3

Minor 5ss
27.3
-2.6
3.6
38.9
42

Minor BPS
78.3
0.88
1.2
80
35.1

Associated Gene:

Gene:
SRSF10

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7003709 - 7008394
4686