About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_7021903_7022324_R


Intron Information:

Intron Rank:
31

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7021903 - 7022324

Intron Length:
422

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTACGTCCC

5'SS Class:
major

3'SS Sequence:
ATTATACTACCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
TCCTCCTCAATT

Flanking Amino Acid:
DLLKELCRISALSASPLKIQ

Intron Amino Acid Position:
1203

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1.1
62.6
42.1

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
69.3
0.43
1
60.8
44.2

Minor 5ss
34.6
-1.8
3.1
42.3
39.5

Minor BPS
69.3
0.69
1.5
79.83
42.7

Associated Gene:

Gene:
MYOM3

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7017561 - 7043186
25626