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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7022364_7022693_R


Intron Information:

Intron Rank:
30

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7022364 - 7022693

Intron Length:
330

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTAAGAGAA

5'SS Class:
major

3'SS Sequence:
TATGTCTTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAAATAT

U12 Branch Point Sequence:
GGTTAGTTAAAT

Flanking Amino Acid:
DYTQLDLTKGSFEDLLKELC

Intron Amino Acid Position:
1190

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.4
0.69
1
73.4
30.6

Major BPS
59.7
0.24
1.1
55.7
39.9

Major PPT
83.3
0.75
0.9
77.3
36.6

Minor 5ss
32.2
-2
3.4
42.7
44.5

Minor BPS
49
0.01
2.3
72.3
43.6

Associated Gene:

Gene:
MYOM3

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7017561 - 7043186
25626