Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_7062937_7063605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7062937 - 7063605

Intron Length:

669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGTAC

5'SS Class:

major

3'SS Sequence:

CCCTTTCAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

CATTACATAATT

Flanking Amino Acid:

VALCFLRQPRGHIQLPPPQN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

63.5

37.6

Major BPS

80.4

0.76

80.3

31.8

Major PPT

66.2

0.37

0.9

66.8

33.2

Minor 5ss

35.3

-1.7

3.5

49.3

47.2

Minor BPS

57.2

0.31

1.8

75.31

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003629

7058108 - 7063663

5556