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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7107899_7108876_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7107899 - 7108876

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

CACTGTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

ATATCCTCACTG

Flanking Amino Acid:

CLHLSSNKVKSVVMIVFDNE

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

28.9

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

72.6

0.51

68.5

41.8

Minor 5ss

30.7

-2.2

3.3

40.8

45.7

Minor BPS

50.5

-0.1

1.9

59.01

42.9

Associated Gene:

Gene:

GRHL3

Ensembl Gene ID:

ENSAPLG00000003161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003230

7092330 - 7120057

27728