Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_7109781_7111552_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7109781 - 7111552

Intron Length:

1772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAACCT

5'SS Class:

major

3'SS Sequence:

TTCCTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

GCTATATCAAAT

Flanking Amino Acid:

FVWNVHEEAKVFIGVNCLST

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

62.6

Major BPS

75.6

0.64

1.5

34.5

Major PPT

85.7

0.8

0.7

80.7

30.1

Minor 5ss

32.9

-2

3.4

49.2

46.5

Minor BPS

44.7

-0.3

1.9

60.26

42.5

Associated Gene:

Gene:

GRHL3

Ensembl Gene ID:

ENSAPLG00000003161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003230

7092330 - 7120057

27728