Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_7114686_7114829_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7114686 - 7114829

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTATCGGTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TATGCTTTATCG

Flanking Amino Acid:

KQTKEEDPQRVLLYVRRESE

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.9

81.8

38.5

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

76.7

0.6

73.2

41.8

Minor 5ss

43.8

-0.7

3.2

64.9

46.4

Minor BPS

57.8

0.11

1.8

64.09

Associated Gene:

Gene:

GRHL3

Ensembl Gene ID:

ENSAPLG00000003161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003230

7092330 - 7120057

27728