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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7132611_7134806_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7132611 - 7134806

Intron Length:

2196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATAACCA

5'SS Class:

weak_major

3'SS Sequence:

TCTCTTGCTAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTCAA

U12 Branch Point Sequence:

GCTTGGTCAATG

Flanking Amino Acid:

NGFNSQSKRFHENPGPGFYN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.1

45.3

36.4

Major BPS

60.5

0.26

1.3

63.4

44.3

Major PPT

59.5

0.21

1.7

68.2

37.6

Minor 5ss

39.9

-1.1

3.1

53.9

Minor BPS

41.1

-0.8

2.5

47.73

45.9

Associated Gene:

Gene:

STPG1

Ensembl Gene ID:

ENSAPLG00000003159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003197

7123344 - 7134871

11528