Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_7142866_7142970_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7142866 - 7142970

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCGATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

TTTTTTCCGATA

Flanking Amino Acid:

IVPLSAVSVIASAIIGIIFI

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

66.8

0.42

1.1

37.7

Major PPT

79.2

0.66

0.9

77.5

31.4

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

47.8

-0.1

1.8

66.28

34.1

Associated Gene:

Gene:

NIPAL3

Ensembl Gene ID:

ENSAPLG00000002628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002664

7140242 - 7149322

9081