Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_7153757_7157947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7153757 - 7157947

Intron Length:

4191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

ATTTACATGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTATTTACAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

57.9

41.8

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

68.5

0.42

1.1

63.6

41.9

Minor 5ss

31.7

-2.1

3.3

41.6

45.3

Minor BPS

58.7

0.35

1.9

82.06

39.2

Associated Gene:

Gene:

RCAN3

Ensembl Gene ID:

ENSAPLG00000002545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017973

7153587 - 7163388

9802