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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7195054_7195198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7195054 - 7195198

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

AGTAACTTGACT

Flanking Amino Acid:

RGSVSPGRASAPKHKSTEKR

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.1

84.6

33.3

Major BPS

0.1

59.7

32.6

Major PPT

86.5

0.82

0.7

85.6

29.2

Minor 5ss

-0.5

66.7

44.2

Minor BPS

62.2

0.47

1.6

76.64

39.1

Associated Gene:

Gene:

SRRM1

Ensembl Gene ID:

ENSAPLG00000002066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021602

7188582 - 7201855

13274

ENSAPLT00000002285

7188582 - 7201869

13288