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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7201514_7201730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7201514 - 7201730

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

AATATTTTATCT

Flanking Amino Acid:

EQEAETEPKKETESEPEDNL

Intron Amino Acid Position:

829

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

76.5

0.6

74.9

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

56.3

0.28

1.6

71.81

39.1

Associated Gene:

Gene:

SRRM1

Ensembl Gene ID:

ENSAPLG00000002066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021602

7188582 - 7201855

13274

ENSAPLT00000002285

7188582 - 7201869

13288