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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7236348_7237409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7236348 - 7237409

Intron Length:

1062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAGTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTCTTCTAATA

Flanking Amino Acid:

QRVLKLSREQAGSDGESIGN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

77.1

31.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

88.7

0.87

0.6

84.5

23.3

Minor 5ss

34.1

-1.8

3.5

47.4

47.9

Minor BPS

53.2

0.1

1.6

65.75

34.5

Associated Gene:

Gene:

CLIC4

Ensembl Gene ID:

ENSAPLG00000019742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017452

7236252 - 7247160

10909