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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7388116_7388194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7388116 - 7388194

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGGCGG

5'SS Class:

major

3'SS Sequence:

CGCTTTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

CGCGGCTCAGTG

Flanking Amino Acid:

ARGCSEAPDGGSSGSEDEAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

51.3

46.9

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

0.61

0.9

68.2

42.3

Minor 5ss

24.3

-3

21.2

37.4

Minor BPS

35.7

-1.2

31.4

41.7

Associated Gene:

Gene:

SYF2

Ensembl Gene ID:

ENSAPLG00000016435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017153

7388059 - 7390269

2211

ENSAPLT00000039469

7388059 - 7390269

2211