Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_7388297_7388474_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7388297 - 7388474

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGCGCGGC

5'SS Class:

major

3'SS Sequence:

GCTTTGTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

GCTTTGTGAACC

Flanking Amino Acid:

RKFRELHMKRNEARKLNHQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.1

48.6

42.7

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

77.1

0.61

0.9

68.5

42.1

Minor 5ss

29.7

-2.3

3.4

32.1

42.7

Minor BPS

49.1

-0

2.2

63.34

42.2

Associated Gene:

Gene:

SYF2

Ensembl Gene ID:

ENSAPLG00000016435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039469

7388059 - 7390269

2211

ENSAPLT00000017153

7388059 - 7390269

2211