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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7392554_7393779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7392554 - 7393779

Intron Length:

1226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TATCTTTCCACT

Flanking Amino Acid:

EHEDSGESDEQPRRLTEDRT

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

78.9

35.3

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

82.2

0.72

0.7

81.2

30.9

Minor 5ss

-1.8

3.5

46.6

48.7

Minor BPS

-0

1.9

70.33

40.7

Associated Gene:

Gene:

RSRP1

Ensembl Gene ID:

ENSAPLG00000023561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031792

7391750 - 7396125

4376

ENSAPLT00000024679

7391451 - 7396125

4675