Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_7395356_7395881_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7395356 - 7395881

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGGCGG

5'SS Class:

major

3'SS Sequence:

ATATTTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATATTTTTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

46.1

49.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

77.8

0.63

39.7

Minor 5ss

28.3

-2.5

3.4

29.2

43.4

Minor BPS

0.81

1.1

78.1

31.8

Associated Gene:

Gene:

RSRP1

Ensembl Gene ID:

ENSAPLG00000023561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031792

7391750 - 7396125

4376