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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7397155_7398182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7397155 - 7398182

Intron Length:

1028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCACATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

CTGTTTTCCACT

Flanking Amino Acid:

CGVIATIAFLMINAVSNGQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

80.1

34.8

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

73.6

0.53

66.7

38.8

Minor 5ss

45.4

-0.5

2.9

62.3

42.4

Minor BPS

47.7

-0.1

66.75

44.7

Associated Gene:

Gene:

TMEM50A

Ensembl Gene ID:

ENSAPLG00000016434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017152

7396526 - 7399931

3406