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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7410481_7411344_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

5UTR

Intron Coordinates:

7410481 - 7411344

Intron Length:

864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTCCTCC

5'SS Class:

weak_minor

3'SS Sequence:

TCTTCTTGTACAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

AGAAAAT

U12 Branch Point Sequence:

TCTTCTTGTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.4

50.3

41.8

Major BPS

48.6

-0

1.2

53.4

38.7

Major PPT

83.7

0.76

0.8

79.4

32.6

Minor 5ss

57.6

0.26

2.1

69.5

Minor BPS

58.6

0.26

1.8

71.77

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016375

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034868

7402553 - 7411519

8967

ENSAPLT00000024393

7402553 - 7411519

8967