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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7438631_7438825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7438631 - 7438825

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTACCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

AATTCTATACCT

Flanking Amino Acid:

LRQENELLQNKLHNAVQMKQ

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

80.7

31.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

0.68

0.9

70.3

Minor 5ss

46.4

-0.4

3.2

66.5

Minor BPS

55.6

0.25

1.9

76.53

39.8

Associated Gene:

Gene:

MACO1

Ensembl Gene ID:

ENSAPLG00000016308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017024

7422265 - 7442367

20103