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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7460820_7462206_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7460820 - 7462206

Intron Length:

1387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTAAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTCTTTAAAA

Flanking Amino Acid:

SSSVNNNMMWEMDDGLDEAF

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.2

36.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

58.5

0.19

1.1

61.2

37.1

Minor 5ss

33.5

-1.9

3.1

36.8

40.4

Minor BPS

71.3

0.67

1.3

74.83

36.6

Associated Gene:

Gene:

LDLRAP1

Ensembl Gene ID:

ENSAPLG00000016262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016971

7451472 - 7466113

14642