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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7506223_7506369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7506223 - 7506369

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCATCCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTATCCTGAGAT

Flanking Amino Acid:

AKKMYDDALEAIEKHLVRRS

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

100

1.24

0.5

100

Major PPT

76.8

0.6

0.8

74.5

30.7

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

53.1

0.18

1.8

72.73

43.1

Associated Gene:

Gene:

MAN1C1

Ensembl Gene ID:

ENSAPLG00000016115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038984

7469928 - 7511298

41371

ENSAPLT00000035313

7476370 - 7518404

42035

ENSAPLT00000016824

7476370 - 7511985

35616