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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7506803_7509421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7506803 - 7509421

Intron Length:

2619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCTCC

5'SS Class:

major

3'SS Sequence:

TGATTTTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

CTCATTATAAAT

Flanking Amino Acid:

ADSWSSGTDRYTKLGPEAFR

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

68.8

37.1

Major BPS

78.6

0.71

78.6

Major PPT

72.5

0.51

45.1

Minor 5ss

47.5

-0.2

2.8

39.4

Minor BPS

46.8

-0.1

1.7

61.95

42.2

Associated Gene:

Gene:

MAN1C1

Ensembl Gene ID:

ENSAPLG00000016115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016824

7476370 - 7511985

35616