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Intron Name: Anas_platyrhynchos_platyrhynchos_24_7510537_7511174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7510537 - 7511174

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTATGGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTTAT

U12 Branch Point Sequence:

CCTGCCTTATGG

Flanking Amino Acid:

QQSFFLAETLKYLYLLFCED

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.5

40.6

Major BPS

61.1

0.28

1.3

53.6

43.8

Major PPT

71.8

0.49

61.7

44.4

Minor 5ss

39.5

-1.2

50.7

39.9

Minor BPS

46.5

-0.4

2.1

50.16

49.8

Associated Gene:

Gene:

MAN1C1

Ensembl Gene ID:

ENSAPLG00000016115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038984

7469928 - 7511298

41371

ENSAPLT00000016824

7476370 - 7511985

35616