Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_815607_815712_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

815607 - 815712

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTGCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CGGTGCTGAGTC

Flanking Amino Acid:

LLAPGLSADQCVLTGRWIND

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

65.9

0.36

0.9

56.5

38.8

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

42.4

-0.6

47.54

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004384

815535 - 816816

1282