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Intron Name: Anas_platyrhynchos_platyrhynchos_24_849366_850533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

849366 - 850533

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

ATTACACCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAC

U12 Branch Point Sequence:

TGTCTCGCAAAT

Flanking Amino Acid:

TSALRRLSSGGSDRYLGSRD

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

40.1

Major BPS

0.35

72.7

31.8

Major PPT

66.8

0.38

0.9

56.1

39.5

Minor 5ss

29.3

-2.4

3.3

Minor BPS

45.1

-0.2

2.2

67.7

42.5

Associated Gene:

Gene:

SCMH1

Ensembl Gene ID:

ENSAPLG00000015777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016462

846822 - 896889

50068