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Intron Name: Anas_platyrhynchos_platyrhynchos_24_862139_862803_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

862139 - 862803

Intron Length:

665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTTAC

U12 Branch Point Sequence:

GGGGGTTTACGT

Flanking Amino Acid:

KQGHGGEVISAVFDREQHTL

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.8

83.3

27.9

Major BPS

53.6

0.09

1.4

49.1

Major PPT

85.2

0.79

0.8

77.2

37.1

Minor 5ss

30.7

-2.2

2.9

41.1

44.9

Minor BPS

38.3

-0.8

2.1

48.15

45.1

Associated Gene:

Gene:

SCMH1

Ensembl Gene ID:

ENSAPLG00000015777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016462

846822 - 896889

50068