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Intron Name: Anas_platyrhynchos_platyrhynchos_24_888498_893819_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

888498 - 893819

Intron Length:

5322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

RPSESPSQYQGHFTWEKYLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

91.3

0.93

0.5

92.5

17.5

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

SCMH1

Ensembl Gene ID:

ENSAPLG00000015777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016462

846822 - 896889

50068