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Intron Name: Anas_platyrhynchos_platyrhynchos_24_893889_896804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

893889 - 896804

Intron Length:

2916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

AATGCTTTATTT

Flanking Amino Acid:

MRKPGPQKAIDWKDGKKH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.2

39.5

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

85.1

0.79

0.8

84.1

30.8

Minor 5ss

32.6

-2

3.4

46.8

48.5

Minor BPS

56.1

0.27

1.7

71.01

40.6

Associated Gene:

Gene:

SCMH1

Ensembl Gene ID:

ENSAPLG00000015777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016462

846822 - 896889

50068