Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_1052373_1052812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1052373 - 1052812

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGTAC

5'SS Class:

major

3'SS Sequence:

ACCCCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CCCTCTCTAACT

Flanking Amino Acid:

WEFKLSDPDEVARRWGKRKN

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.1

63.3

37.9

Major BPS

72.3

0.55

73.3

28.9

Major PPT

70.4

0.46

0.8

61.1

34.4

Minor 5ss

-1.7

3.6

48.7

47.8

Minor BPS

58.9

0.36

1.8

71.75

45.6

Associated Gene:

Gene:

ETS1

Ensembl Gene ID:

ENSAPLG00000003526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026566

1051157 - 1074159

23003

ENSAPLT00000003631

1051157 - 1101120

49964