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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1064332_1067869_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1064332 - 1067869

Intron Length:
3538

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACAGTTG

5'SS Class:
major

3'SS Sequence:
TCCTTCTACCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTCAC

U12 Branch Point Sequence:
CTTCCTTCTACC

Flanking Amino Acid:
DNMCMGRASRGKLGGQDSFE

Intron Amino Acid Position:
243

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.3
0.5
1.1
63.9
42.9

Major BPS
72.7
0.56
1
75
30.1

Major PPT
75.8
0.58
0.8
69
36.1

Minor 5ss
38.6
-1.3
3.6
55.1
49.1

Minor BPS
49.4
-0
1.9
64.35
41.3

Associated Gene:

Gene:
ETS1

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1051157 - 1074159
23003

1051157 - 1101120
49964