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Intron Name: Anas_platyrhynchos_platyrhynchos_25_113950_122688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113950 - 122688

Intron Length:

8739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTCATTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTCTGTTCATTT

Flanking Amino Acid:

KIKQESSEDTQKRDVMQNIM

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

84.8

0.86

85.7

34.9

Major PPT

87.6

0.85

0.8

80.3

37.1

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

45.9

-0.2

2.1

67.22

44.6

Associated Gene:

Gene:

MSANTD2

Ensembl Gene ID:

ENSAPLG00000012824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013345

113097 - 135499

22403