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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1181614_1223608_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1181614 - 1223608

Intron Length:

41995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

TTAGTCATGACT

Flanking Amino Acid:

MDGTIKEALSVQEWIN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

0.67

1.1

77.7

37.1

Major PPT

86.2

0.81

0.6

22.5

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

55.9

0.27

1.7

76.38

40.2

Associated Gene:

Gene:

FLI1

Ensembl Gene ID:

ENSAPLG00000003677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042186

1181596 - 1261147

79552

ENSAPLT00000024448

1181596 - 1260399

78804