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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1317171_1327688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1317171 - 1327688

Intron Length:

10518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCATCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTGCATTTAACA

Flanking Amino Acid:

VILEGMVEATGMTCQARSSY

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

84.4

33.5

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

81.7

0.71

0.8

74.2

35.6

Minor 5ss

-0.9

2.9

58.6

45.7

Minor BPS

65.8

0.49

1.5

73.8

37.7

Associated Gene:

Gene:

KCNJ5

Ensembl Gene ID:

ENSAPLG00000003864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032304

1281022 - 1329501

48480

ENSAPLT00000003946

1294735 - 1329501

34767