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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1351362_1352618_F

Intron Information:

Intron Rank:

141949

Intron Class:

major

Intron Phase:

Intron Coordinates:

1351362 - 1352618

Intron Length:

1257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGCTCA

5'SS Class:

major

3'SS Sequence:

GTTTTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CAATTCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

66.4

35.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.81

0.7

84.9

29.9

Minor 5ss

44.8

-0.6

2.7

56.5

47.9

Minor BPS

57.9

0.33

1.6

69.26

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047018

1350621 - 1352643

2023

ENSAPLT00000028886

1348708 - 1352835

4128