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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1387658_1388838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1387658 - 1388838

Intron Length:

1181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TGCATTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTAATTCAACT

Flanking Amino Acid:

PSEMKAIALAGGRGDSGTLR

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

73.1

0.52

0.9

68.1

37.5

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

54.7

0.23

1.8

75.21

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036896

1376904 - 1397145

20242

ENSAPLT00000003966

1376904 - 1397145

20242