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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1389966_1392171_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1389966 - 1392171

Intron Length:

2206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGACTTCC

5'SS Class:

weak_major

3'SS Sequence:

TTTCAGGGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

TTCCCTTTCAGG

Flanking Amino Acid:

LSSVIRDGAGASLSRPKSLL

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.5

0.04

1.4

53.7

40.7

Major BPS

63.7

0.34

1.6

39.9

Major PPT

63.3

0.3

1.1

56.6

43.1

Minor 5ss

42.5

-0.8

2.7

40.5

Minor BPS

47.1

-0.3

2.1

55.9

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036896

1376904 - 1397145

20242

ENSAPLT00000003966

1376904 - 1397145

20242