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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1525137_1544792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1525137 - 1544792

Intron Length:

19656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAACAC

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTC

Flanking Amino Acid:

PDWEETLSAMARGADIPDIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

61.1

37.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.2

0.81

0.8

80.6

Minor 5ss

31.8

-2.1

3.2

40.7

Minor BPS

67.3

0.52

1.5

77.16

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038485

1523244 - 1544948

21705