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Intron Name: Anas_platyrhynchos_platyrhynchos_25_155128_155202_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
155128 - 155202

Intron Length:
75

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTGCGTGGG

5'SS Class:
major

3'SS Sequence:
AGCTGCCCCACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGTGAC

U12 Branch Point Sequence:
AGGGCTGTGACA

Flanking Amino Acid:
DSEPAELVVFERPTFSKWPL

Intron Amino Acid Position:
252

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70
0.47
1.1
54.6
44.5

Major BPS
59
0.22
1.2
52.4
43.3

Major PPT
62.9
0.29
0.9
54.1
36.1

Minor 5ss
26.1
-2.8
3.2
31.1
42.9

Minor BPS
44.8
-0.4
2.1
52.39
40.1

Associated Gene:

Gene:
ROBO3

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

151787 - 160722
8936

151787 - 160879
9093