Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_155838_155921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155838 - 155921

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

CCCCCTGTACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAA

U12 Branch Point Sequence:

CCCCCCTGTACC

Flanking Amino Acid:

SEASGTLIVRVPPQLVTWPH

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

60.5

44.3

Major BPS

0.2

1.3

69.6

37.5

Major PPT

64.9

0.33

57.1

37.4

Minor 5ss

28.8

-2.4

3.5

34.5

43.8

Minor BPS

-0.2

1.8

52.74

44.6

Associated Gene:

Gene:

ROBO3

Ensembl Gene ID:

ENSAPLG00000012600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013119

151787 - 160879

9093

ENSAPLT00000040096

151787 - 160722

8936