Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_156047_156128_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

156047 - 156128

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTCCC

5'SS Class:

major

3'SS Sequence:

CTTCCTCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCACAC

U12 Branch Point Sequence:

CCCACCACACAG

Flanking Amino Acid:

AVFWQKEGSQTLLFPGQPPQ

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.3

62.4

42.4

Major BPS

48.6

-0

54.6

31.2

Major PPT

77.6

0.62

0.7

69.4

31.3

Minor 5ss

-1.5

2.7

45.9

42.2

Minor BPS

34.2

-1.3

1.9

30.14

40.9

Associated Gene:

Gene:

ROBO3

Ensembl Gene ID:

ENSAPLG00000012600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013119

151787 - 160879

9093

ENSAPLT00000040096

151787 - 160722

8936