Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_156845_156928_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

156845 - 156928

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

CTCTCCTCACAG

Flanking Amino Acid:

TRWSGTLQVQGDGSGLSPPP

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

83.9

30.3

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

77.9

0.63

0.7

71.6

26.5

Minor 5ss

36.5

-1.5

2.9

49.7

46.6

Minor BPS

46.5

-0.4

52.48

47.8

Associated Gene:

Gene:

ROBO3

Ensembl Gene ID:

ENSAPLG00000012600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040096

151787 - 160722

8936

ENSAPLT00000013119

151787 - 160879

9093