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Intron Name: Anas_platyrhynchos_platyrhynchos_25_160472_160540_F


Intron Information:

Intron Rank:
25

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
160472 - 160540

Intron Length:
69

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGTGGG

5'SS Class:
strong_major

3'SS Sequence:
TCCCTCCCTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACCCAT

U12 Branch Point Sequence:
TCAGCCCCCACT

Flanking Amino Acid:
SRYRREQHLGADLPPPPLPP

Intron Amino Acid Position:
1197

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89
0.92
0.8
72.2
39.5

Major BPS
52.1
0.05
1.2
62.1
35.8

Major PPT
79.1
0.66
0.7
73
25.2

Minor 5ss
26.6
-2.7
3
31.5
42.8

Minor BPS
42.6
-0.5
2.3
61.61
47.7

Associated Gene:

Gene:
ROBO3

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

151787 - 160879
9093