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Intron Name: Anas_platyrhynchos_platyrhynchos_25_162999_163076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162999 - 163076

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GCTGCACTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAG

U12 Branch Point Sequence:

TTCAGCAGAAGG

Flanking Amino Acid:

LGTIPIPVSGGGDLWWLPAL

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

48.3

-0.1

1.7

59.3

47.1

Major PPT

60.9

0.25

1.1

54.6

40.4

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

38.3

-1

2.2

45.75

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012529

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028694

161326 - 167221

5896