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Intron Name: Anas_platyrhynchos_platyrhynchos_25_165682_166312_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

165682 - 166312

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCAGTGCC

5'SS Class:

major

3'SS Sequence:

CCTTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAC

U12 Branch Point Sequence:

TTACACTCACCT

Flanking Amino Acid:

AAATTRVQVEDLLPAGRREV

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

68.2

38.2

Major BPS

0.35

72.7

31.8

Major PPT

83.1

0.74

0.7

77.2

24.8

Minor 5ss

28.9

-2.4

2.9

28.7

35.6

Minor BPS

48.5

-0

72.18

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012529

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042305

161329 - 167221

5893

ENSAPLT00000028694

161326 - 167221

5896