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Intron Name: Anas_platyrhynchos_platyrhynchos_25_166441_166514_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

166441 - 166514

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTGGTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

GGGTGTGTGACA

Flanking Amino Acid:

HKENGDLPWGRHEVDQEHTL

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

76.2

39.9

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

69.7

0.44

39.9

Minor 5ss

-1.9

3.5

49.2

47.1

Minor BPS

42.1

-0.6

2.3

50.98

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012529

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042305

161329 - 167221

5893

ENSAPLT00000028694

161326 - 167221

5896