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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1718600_1721572_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1718600 - 1721572

Intron Length:

2973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

GTCAACTCAATT

Flanking Amino Acid:

QKQKYLSTPDRLDLAQSLGL

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

74.2

0.6

0.9

75.7

Major PPT

0.85

0.8

80.2

37.3

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

49.6

0.05

1.8

67.05

43.4

Associated Gene:

Gene:

BARX2

Ensembl Gene ID:

ENSAPLG00000023705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017777

1688699 - 1724242

35544