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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1721658_1722902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1721658 - 1722902

Intron Length:

1245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTGATCCTGACT

Flanking Amino Acid:

QNRRMKWKKMVLKGGQEAPT

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

84.4

0.85

34.5

Major PPT

80.6

0.69

0.8

72.6

37.6

Minor 5ss

34.5

-1.8

3.3

46.4

44.2

Minor BPS

56.2

0.28

1.7

76.29

40.3

Associated Gene:

Gene:

BARX2

Ensembl Gene ID:

ENSAPLG00000023705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017777

1688699 - 1724242

35544